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The Regularized Resolvent Transform


The Regularized Resolvent Transfrom (RRT) is a new method recently developed for high resolution spectral estimation. It emerges naturally from the Filter Diagonalization Method (FDM), but requires no diagonalization. It is a direct transformation of time domain data into the frequency domain spectra (just like Fourier Transform!). RRT is numerically very efficient, and easy to use with little need to fiddle with different parameters. RRT uses the same data matrices as what are computed in FDM, but constructs the spectra without obtaining the intermediate spectral parameters (complex frequencies and amplitudes).  During the contstruction of the spectra, one needs to invert the matix pencils.  These matrices are typically singular and require regularization. Among various ways of regularization, Tikhonov regularization is particularly efficient easy to implement.  A regularization parameter is then introduced when applying Tikhonov regularization. A large regularization suppresses the artifacts and small spectral features, providing a more uniform spectral estimation with decreasing resolution. For signals that are too heavily truncated, RRT spectra may show some instablility especially considering the phase of peaks. In these cases, an Extend Fourier Transform (XFT),  which combines DFT with RRT, is proposed to improve the preformance. For more details, please refer to Ref. 1 or download a poster about RRT(JPEG file, 345K), which was presented recently on 42nd ENC meeting in Orlando, Florida.
1D example
2D example
references
A 1D Example: 1D RRT applied to a model signal called "Jacob's Ladder", with comparisons to FDM and DFT.  The variable "q" is the regularization parameter, and the numbers shown are normalized according to the norm of the complex signal.

(click here to view a larger version)
1D RRT of Jacob's Ladder model signal





A 2D Example: Comparison of 2D DFT and 2D RRT spectra of a constant time HSQC NMR signal of human ubiquitin in D2O (2). The signal used contains 2048x128 complex data points. The FT picture is too blurry to be very useful, while the RRT spectra shows significant resolution enhancement.

   (click to view a larger version)
2D DFT and 2D RRT spectra of CT-HSQC of human ubiquitin

References

1. J. Chen, A. J. Shaka, V. A. Mandelstam, J. Magn. Reson. 147, 129 (2000).
2. A. A. De Angelis, J. Chen, V. A. Mandelstham and A. J. Shaka, J. Biomol. NMR (submitted).

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Copyright 2001, Afarnti. Last updated, 04/08/2001



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